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Reforms are needed to increase transparency in the management of private universities that absorb 80% of university students in the country. The Ministry of Education reform proposal, which is awaiting deliberation, would enhance the powers of the board of trustees responsible for key university management decisions and which, under the government's proposals, will be composed only of outsiders. This is a major change from the current role of the board, which is facilitating cover-ups of malpractice.

The University of Energy and Natural Resources in Ghana and the University of Rwanda have been the only African public universities providing reports including information such as the university structure, number and qualifications of academic and support staff, total enrolment, and the number of graduates. These reports are a model for universities to adopt and a means of promoting transparency, integrity, and accountability amongst faculty members, staff, students, and communities.

Academic corruption linked to the COVID-19 pandemic highlights the urgency of strengthening transparency and accountability in African universities. Such corruption includes research malpractice, questionable research management, mismanagement of research funds and procurement fraud. Several university officials bypassed public procurement procedures for the purchase of materials and equipment for coronavirus research. 33 papers were identified as unsuitable for public use and either retracted, withdrawn, or noted with concern.

According to a report carried out by Universities UK, the Higher education institutions should stop rounding up borderline marks and avoid discounting core or final-year modules. This comes in response to a warning from the Universities Minister that too many institutions felt pressured to lower their admission standards. The report sets out six measures to ensure transparency in the calculation of final grades and calls for a single algorithm to be used to calculate the final grade that the students receive.