A high-ranking Department of Education employee used his position to rip off $5 billion from the Government money that should have been spent on public schools. According to the State's anti-corruption, watchdog IBAC, for 7 years he covered his tracks by organizing fake invoices sent from companies owned by him and his friends and family that did not do any work.

Six senior government officials in the Ministry of Education have been relieved of their duties in relation to massive corruption, abuse of office, fictitious procurements and embezzlement of public resources spanning more than 20 years. The President has also directed that the Contracts Committee of the same ministry be "disbanded with immediate effect" in relation to the "mishandling of the process for procuring furniture for selected primary schools in Uganda under the Ministry of Education and Sports".

National Accountability Bureau (NAB) officials have started collecting evidence pertaining to alleged corruption and financial mismanagement of at least Rs 4 billion in the Prime Minister’s Education Reform Programme. The former prime minister had given at least Rs 4 billion to improve the conditions of 423 federal public educational institutions that come under the purview of the Capital Administration and Development Division (CADD) through the Prime Minister’s Education Reform Programme. Corruption and financial mismanagement has allegedly been done in funds allocated for paint jobs, furniture procurement, and construction and renovation projects.